Class: TaxonNameRelationship::Iczn

Inherits:
TaxonNameRelationship show all
Defined in:
app/models/taxon_name_relationship/iczn.rb

Direct Known Subclasses

Invalidating, PotentiallyValidating, Validating

Defined Under Namespace

Classes: Invalidating, PotentiallyValidating, Validating

Constant Summary collapse

NOMEN_URI = 
'http://purl.obolibrary.org/obo/NOMEN_0000233'.freeze

Constants included from SoftValidation

SoftValidation::ANCESTORS_WITH_SOFT_VALIDATIONS

Instance Attribute Summary

Attributes inherited from TaxonNameRelationship

#no_cached, #object_taxon_name_id, #project_id, #subject_taxon_name_id, #type

Class Method Summary collapse

Instance Method Summary collapse

Methods inherited from TaxonNameRelationship

assignable, collect_descendants_and_itself_to_s, collect_descendants_to_s, collect_to_s, disjoint_taxon_name_relationships, #dwc_occurrences, gbif_status_of_object, gbif_status_of_subject, #is_combination?, #is_invalidating?, nomen_uri, nomenclatural_priority, #nomenclature_date, #object_properties, #object_status, #object_status_connector_to_subject, #object_status_tag, parent, required_taxon_name_relationships, #set_cached_names_for_taxon_names, #subject_and_object_in_same_project, #subject_invalid_statuses, #subject_properties, #subject_status, #subject_status_connector_to_object, #subject_status_tag, #sv_coordinated_taxa, #sv_coordinated_taxa_object, #sv_fix_combination_relationship, #sv_fix_coordinated_object_taxa, #sv_fix_coordinated_subject_taxa, #sv_fix_not_specific_relationship, #sv_fix_objective_synonym_relationship, #sv_fix_subject_parent_update, #sv_not_specific_relationship, #sv_objective_synonym_relationship, #sv_specific_relationship, #sv_synonym_linked_to_valid_name, #sv_synonym_relationship, #sv_validate_disjoint_object, #sv_validate_disjoint_relationships, #sv_validate_disjoint_subject, #sv_validate_required_relationships, #sv_validate_seniority, #type_class, #type_class=, #type_name, #validate_object_and_subject_both_protonyms, #validate_object_must_equal_subject_for_uncertain_placement, #validate_rank_group, #validate_subject_and_object_are_not_identical, #validate_subject_and_object_ranks, #validate_subject_and_object_share_code, #validate_type, #validate_uniqueness_of_typification_object

Methods included from Shared::IsData

#errors_excepting, #full_error_messages_excepting, #identical, #is_community?, #is_destroyable?, #is_editable?, #is_in_use?, #is_in_users_projects?, #metamorphosize, #similar

Methods included from SoftValidation

#clear_soft_validations, #fix_for, #fix_soft_validations, #soft_fixed?, #soft_valid?, #soft_validate, #soft_validated?, #soft_validations, #soft_validators

Methods included from Shared::Notes

#concatenated_notes_string, #reject_notes

Methods included from Shared::Citations

#cited?, #mark_citations_for_destruction, #nomenclature_date, #origin_citation_source_id, #reject_citations, #requires_citation?, #sources_by_topic_id

Methods included from Housekeeping

#has_polymorphic_relationship?

Methods inherited from ApplicationRecord

transaction_with_retry

Class Method Details

.disjoint_object_classes ⇒ Object 



21
22
23
24
 
# File 'app/models/taxon_name_relationship/iczn.rb', line 21

def self.disjoint_object_classes
  ICN_TAXON_NAME_CLASSIFICATION_NAMES + ICNP_TAXON_NAME_CLASSIFICATION_NAMES + ICVCN_TAXON_NAME_CLASSIFICATION_NAMES +
    self.collect_descendants_and_itself_to_s(TaxonNameClassification::Iczn::Unavailable)
end

.disjoint_subject_classes ⇒ Object 



17
18
19
 
# File 'app/models/taxon_name_relationship/iczn.rb', line 17

def self.disjoint_subject_classes
  ICN_TAXON_NAME_CLASSIFICATION_NAMES + ICNP_TAXON_NAME_CLASSIFICATION_NAMES + ICVCN_TAXON_NAME_CLASSIFICATION_NAMES
end

.valid_object_ranks ⇒ Object

right_side



13
14
15
 
# File 'app/models/taxon_name_relationship/iczn.rb', line 13

def self.valid_object_ranks
  ::ICZN #FAMILY_RANK_NAMES_ICZN + GENUS_AND_SPECIES_RANK_NAMES_ICZN
end

.valid_subject_ranks ⇒ Object

left_side



8
9
10
 
# File 'app/models/taxon_name_relationship/iczn.rb', line 8

def self.valid_subject_ranks
  ::ICZN #FAMILY_RANK_NAMES_ICZN + GENUS_AND_SPECIES_RANK_NAMES_ICZN
end

Instance Method Details

#sv_validate_priority ⇒ Object 



26
27
28
29
30
31
32
33
34
35
36
 
# File 'app/models/taxon_name_relationship/iczn.rb', line 26

def sv_validate_priority
  if self.type_class.nomenclatural_priority == :direct
    date1 = self.subject_taxon_name.cached_nomenclature_date
    date2 = self.object_taxon_name.cached_nomenclature_date
    if !!date1 && !!date2 && date2 > date1 && subject_invalid_statuses.empty?
      if self.subject_taxon_name.is_available? && TaxonNameRelationship.where_subject_is_taxon_name(self.subject_taxon_name).with_two_type_bases('TaxonNameRelationship::Iczn::Invalidating::Homonym', 'TaxonNameRelationship::Iczn::Validating').not_self(self).empty?
        soft_validations.add(:type, "#{self.subject_status.capitalize} #{self.subject_taxon_name.cached_html_name_and_author_year} should not be older than #{self.object_status} #{self.object_taxon_name.cached_html_name_and_author_year}, unless it is also a homonym or conserved name")
      end
    end
  end
end