Class: TaxonNameRelationship::Iczn::Invalidating
- Inherits:
-
TaxonNameRelationship::Iczn
- Object
- ActiveRecord::Base
- ApplicationRecord
- TaxonNameRelationship
- TaxonNameRelationship::Iczn
- TaxonNameRelationship::Iczn::Invalidating
- Defined in:
- app/models/taxon_name_relationship/iczn/invalidating.rb
Direct Known Subclasses
Defined Under Namespace
Classes: Homonym, Misapplication, Synonym, Usage
Constant Summary collapse
- NOMEN_URI =
'http://purl.obolibrary.org/obo/NOMEN_0000272'.freeze
Constants included from SoftValidation
SoftValidation::ANCESTORS_WITH_SOFT_VALIDATIONS
Instance Attribute Summary
Attributes inherited from TaxonNameRelationship
#no_cached, #object_taxon_name_id, #project_id, #subject_taxon_name_id, #type
Class Method Summary collapse
- .assignable ⇒ Object
-
.assignment_method ⇒ Object
as.
- .disjoint_subject_classes ⇒ Object
- .disjoint_taxon_name_relationships ⇒ Object
- .gbif_status_of_subject ⇒ Object
- .inverse_assignment_method ⇒ Object
- .nomenclatural_priority ⇒ Object
Instance Method Summary collapse
- #object_status ⇒ Object
- #object_status_connector_to_subject ⇒ Object
-
#similar_homonym_string ⇒ Boolean
See use in Protonym.becomes_combination.
- #subject_properties ⇒ Object
- #subject_status ⇒ Object
- #subject_status_connector_to_object ⇒ Object
- #sv_not_specific_relationship ⇒ Object
Methods inherited from TaxonNameRelationship::Iczn
disjoint_object_classes, #sv_validate_priority, valid_object_ranks, valid_subject_ranks
Methods inherited from TaxonNameRelationship
collect_descendants_and_itself_to_s, collect_descendants_to_s, collect_to_s, disjoint_object_classes, gbif_status_of_object, #is_combination?, #is_invalidating?, nomen_uri, #nomenclature_date, #object_properties, #object_status_tag, parent, required_taxon_name_relationships, #set_cached_names_for_taxon_names, #subject_and_object_in_same_project, #subject_invalid_statuses, #subject_status_tag, #sv_coordinated_taxa, #sv_coordinated_taxa_object, #sv_fix_combination_relationship, #sv_fix_coordinated_object_taxa, #sv_fix_coordinated_subject_taxa, #sv_fix_not_specific_relationship, #sv_fix_objective_synonym_relationship, #sv_fix_subject_parent_update, #sv_objective_synonym_relationship, #sv_specific_relationship, #sv_synonym_linked_to_valid_name, #sv_synonym_relationship, #sv_validate_disjoint_object, #sv_validate_disjoint_relationships, #sv_validate_disjoint_subject, #sv_validate_priority, #sv_validate_required_relationships, #type_class, #type_class=, #type_name, valid_object_ranks, valid_subject_ranks, #validate_object_and_subject_both_protonyms, #validate_object_must_equal_subject_for_uncertain_placement, #validate_rank_group, #validate_subject_and_object_are_not_identical, #validate_subject_and_object_ranks, #validate_subject_and_object_share_code, #validate_type, #validate_uniqueness_of_typification_object
Methods included from SoftValidation
#clear_soft_validations, #fix_for, #fix_soft_validations, #soft_fixed?, #soft_valid?, #soft_validate, #soft_validated?, #soft_validations, #soft_validators
Methods included from Shared::IsData
#errors_excepting, #full_error_messages_excepting, #identical, #is_community?, #is_destroyable?, #is_editable?, #is_in_use?, #is_in_users_projects?, #metamorphosize, #similar
Methods included from Shared::Notes
#concatenated_notes_string, #reject_notes
Methods included from Shared::Citations
#cited?, #mark_citations_for_destruction, #nomenclature_date, #origin_citation_source_id, #reject_citations, #requires_citation?, #sources_by_topic_id
Methods included from Housekeeping
#has_polymorphic_relationship?
Methods inherited from ApplicationRecord
Class Method Details
.assignable ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 20 def self.assignable true end |
.assignment_method ⇒ Object
as.
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 52 def self.assignment_method # bus.set_as_iczn_invalid_of(aus) :iczn_set_as_invalid_of end |
.disjoint_subject_classes ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 10 def self.disjoint_subject_classes self.parent.disjoint_subject_classes + self.collect_descendants_to_s(TaxonNameClassification::Iczn::Available::Valid) + self.collect_to_s(TaxonNameClassification::Iczn::Available) end |
.disjoint_taxon_name_relationships ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 5 def self.disjoint_taxon_name_relationships self.parent.disjoint_taxon_name_relationships + self.collect_descendants_and_itself_to_s(TaxonNameRelationship::Iczn::Validating) end |
.gbif_status_of_subject ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 46 def self.gbif_status_of_subject 'invalidum' end |
.inverse_assignment_method ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 57 def self.inverse_assignment_method # aus.iczn_invalid = bus ## Equal to synonym in broad sense :iczn_invalid end |
.nomenclatural_priority ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 16 def self.nomenclatural_priority :direct end |
Instance Method Details
#object_status ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 33 def object_status 'valid' end |
#object_status_connector_to_subject ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 41 def object_status_connector_to_subject ' for' end |
#similar_homonym_string ⇒ Boolean
Returns See use in Protonym.becomes_combination. It does not make sense to run this on all relationships.
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 64 def similar_homonym_string a = subject_taxon_name b = object_taxon_name if a.is_species_rank? return true if a.cached_secondary_homonym_alternative_spelling && (a.cached_secondary_homonym_alternative_spelling == b.cached_secondary_homonym_alternative_spelling) elsif a.is_genus_rank? return true if a.cached_primary_homonym_alternative_spelling && (a.cached_primary_homonym_alternative_spelling == b.cached_primary_homonym_alternative_spelling) else return false end false end |
#subject_properties ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 24 def subject_properties [ TaxonNameClassification::Iczn::Available::Invalid ] end |
#subject_status ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 29 def subject_status 'unavailable or invalid' end |
#subject_status_connector_to_object ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 37 def subject_status_connector_to_object ', linked to' end |
#sv_not_specific_relationship ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating.rb', line 78 def sv_not_specific_relationship if self.subject_taxon_name.is_available? soft_validations.add(:type, 'Please specify the reason for the name being Invalid') end end |