Class: TaxonNameRelationship::Iczn::Invalidating::Synonym::Objective
- Inherits:
-
TaxonNameRelationship::Iczn::Invalidating::Synonym
- Object
- ActiveRecord::Base
- ApplicationRecord
- TaxonNameRelationship
- TaxonNameRelationship::Iczn
- TaxonNameRelationship::Iczn::Invalidating
- TaxonNameRelationship::Iczn::Invalidating::Synonym
- TaxonNameRelationship::Iczn::Invalidating::Synonym::Objective
- Defined in:
- app/models/taxon_name_relationship/iczn/invalidating/synonym/objective.rb
Direct Known Subclasses
ReplacedHomonym, SynonymicHomonym, UnjustifiedEmendation, UnnecessaryReplacementName
Defined Under Namespace
Classes: ReplacedHomonym, SynonymicHomonym, UnjustifiedEmendation, UnnecessaryReplacementName
Constant Summary collapse
- NOMEN_URI =
'http://purl.obolibrary.org/obo/NOMEN_0000277'.freeze
Constants included from SoftValidation
SoftValidation::ANCESTORS_WITH_SOFT_VALIDATIONS
Instance Attribute Summary
Attributes inherited from TaxonNameRelationship
#no_cached, #object_taxon_name_id, #project_id, #subject_taxon_name_id, #type
Class Method Summary collapse
- .assignment_method ⇒ Object
- .disjoint_taxon_name_relationships ⇒ Object
-
.inverse_assignment_method ⇒ Object
as.
Instance Method Summary collapse
- #object_status ⇒ Object
- #subject_status ⇒ Object
- #sv_fix_objective_synonym_relationship ⇒ Object
- #sv_not_specific_relationship ⇒ Object
- #sv_objective_synonym_relationship ⇒ Object
Methods inherited from TaxonNameRelationship::Iczn::Invalidating::Synonym
disjoint_object_classes, #object_status_connector_to_subject, #subject_status_connector_to_object, #sv_fix_not_specific_relationship, #sv_synonym_relationship
Methods inherited from TaxonNameRelationship::Iczn::Invalidating
assignable, disjoint_object_classes, disjoint_subject_classes, gbif_status_of_subject, nomenclatural_priority, #object_status_connector_to_subject, #similar_homonym_string, #subject_properties, #subject_status_connector_to_object, #sv_synonym_relationship
Methods inherited from TaxonNameRelationship::Iczn
disjoint_object_classes, disjoint_subject_classes, #sv_validate_priority, valid_object_ranks, valid_subject_ranks
Methods inherited from TaxonNameRelationship
assignable, collect_descendants_and_itself_to_s, collect_descendants_to_s, collect_to_s, disjoint_object_classes, disjoint_subject_classes, #dwc_occurrences, gbif_status_of_object, gbif_status_of_subject, #is_combination?, #is_invalidating?, nomen_uri, nomenclatural_priority, #nomenclature_date, #object_properties, #object_status_connector_to_subject, #object_status_tag, parent, required_taxon_name_relationships, #set_cached_names_for_taxon_names, #subject_and_object_in_same_project, #subject_invalid_statuses, #subject_properties, #subject_status_connector_to_object, #subject_status_tag, #sv_coordinated_taxa, #sv_coordinated_taxa_object, #sv_fix_combination_relationship, #sv_fix_coordinated_object_taxa, #sv_fix_coordinated_subject_taxa, #sv_fix_not_specific_relationship, #sv_fix_subject_parent_update, #sv_specific_relationship, #sv_synonym_linked_to_valid_name, #sv_synonym_relationship, #sv_validate_disjoint_object, #sv_validate_disjoint_relationships, #sv_validate_disjoint_subject, #sv_validate_priority, #sv_validate_required_relationships, #sv_validate_seniority, #type_class, #type_class=, #type_name, valid_object_ranks, valid_subject_ranks, #validate_object_and_subject_both_protonyms, #validate_object_must_equal_subject_for_uncertain_placement, #validate_rank_group, #validate_subject_and_object_are_not_identical, #validate_subject_and_object_ranks, #validate_subject_and_object_share_code, #validate_type, #validate_uniqueness_of_typification_object
Methods included from SoftValidation
#clear_soft_validations, #fix_for, #fix_soft_validations, #soft_fixed?, #soft_valid?, #soft_validate, #soft_validated?, #soft_validations, #soft_validators
Methods included from Shared::IsData
#errors_excepting, #full_error_messages_excepting, #identical, #is_community?, #is_destroyable?, #is_editable?, #is_in_use?, #is_in_users_projects?, #metamorphosize, #similar
Methods included from Shared::Notes
#concatenated_notes_string, #reject_notes
Methods included from Shared::Citations
#cited?, #mark_citations_for_destruction, #nomenclature_date, #origin_citation_source_id, #reject_citations, #requires_citation?, #sources_by_topic_id
Methods included from Housekeeping
#has_polymorphic_relationship?
Methods inherited from ApplicationRecord
Class Method Details
.assignment_method ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating/synonym/objective.rb', line 19 def self.assignment_method # bus.set_as_iczn_objective_synonym_of(aus) :iczn_set_as_objective_synonym_of end |
.disjoint_taxon_name_relationships ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating/synonym/objective.rb', line 5 def self.disjoint_taxon_name_relationships self.parent.disjoint_taxon_name_relationships + self.collect_descendants_and_itself_to_s(TaxonNameRelationship::Iczn::Invalidating::Synonym::Suppression) + self.collect_to_s(TaxonNameRelationship::Iczn::Invalidating::Synonym) end |
.inverse_assignment_method ⇒ Object
as.
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# File 'app/models/taxon_name_relationship/iczn/invalidating/synonym/objective.rb', line 25 def self.inverse_assignment_method # aus.iczn_objective_synonym = bus :iczn_objective_synonym end |
Instance Method Details
#object_status ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating/synonym/objective.rb', line 11 def object_status 'senior objective synonym' end |
#subject_status ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating/synonym/objective.rb', line 15 def subject_status 'objective synonym' end |
#sv_fix_objective_synonym_relationship ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating/synonym/objective.rb', line 38 def sv_fix_objective_synonym_relationship fixed = false s = self.subject_taxon_name o = self.object_taxon_name if s.get_primary_type.empty? t2 = s t1 = o elsif o.get_primary_type.empty? t2 = o t1 = s else return false end types2 = t1.get_primary_type tnr2 = t1.type_taxon_name_relationship unless types2.empty? new_type_material = [] types2.each do |t| new_type_material.push({type_type: t.type_type, protonym_id: t2.id, collection_object_id: t.collection_object_id, source: t.source}) end t2.type_materials.build(new_type_material) fixed = true end unless tnr2.nil? tnr = t2..build(type: tnr2.type, subject_taxon_name_id: tnr2.subject_taxon_name_id) c2 = tnr2.citations.where(is_original: true).first tnr.citations.build(source_id: c2.source_id, pages: c2.pages) unless c2.nil? fixed = true end if fixed begin Protonym.transaction do t2.save end return true rescue return false end end end |
#sv_not_specific_relationship ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating/synonym/objective.rb', line 81 def sv_not_specific_relationship true end |
#sv_objective_synonym_relationship ⇒ Object
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# File 'app/models/taxon_name_relationship/iczn/invalidating/synonym/objective.rb', line 30 def sv_objective_synonym_relationship s = self.subject_taxon_name o = self.object_taxon_name if (s.type_taxon_name != o.type_taxon_name ) || !s.has_same_primary_type(o) soft_validations.add(:type, "Objective synonyms #{s.cached_html} and #{o.cached_html} should have the same type") end end |